cobra/
cobra/addLoopLawConstraints.m
cobra/analyzeRxns.m
cobra/changeGeneAssociation.m
cobra/CHANGELOG
cobra/changeObjective.m
cobra/changeRxnBounds.m
cobra/changeRxnMets.m
cobra/checkCobraModelUnique.m
cobra/checkDuplicateRxn.m
cobra/checkObjective.m
cobra/computeElementalMatrix.m
cobra/computeMW.m
cobra/convertIrrevFluxDistribution.m
cobra/convertModelToEX.m
cobra/convertToIrreversible.m
cobra/convertToReversible.m
cobra/deleteModelGenes.m
cobra/design/
cobra/design/alphabetizeModel.m
cobra/design/analyzeGCdesign.m
cobra/design/analyzeOptKnock.m
cobra/design/augmentBOF.m
cobra/design/createBilevelMILPproblem.m
cobra/design/doubleProductionEnvelope.m
cobra/design/findCarbonRxns.m
cobra/design/findHiCarbonRxns.m
cobra/design/GDLS.m
cobra/design/GetOptGeneSol.m
cobra/design/multiProductionEnvelope.m
cobra/design/multiProductionEnvelopeInorg.m
cobra/design/optGene.m
cobra/design/optGeneFitness.m
cobra/design/optGeneFitnessTilt.m
cobra/design/OptKnock.m
cobra/design/randomKO.m
cobra/design/setConstraintsIrrevModel.m
cobra/design/simpleOptKnock.m
cobra/design/testOptKnockSol.m
cobra/design/theoretMaxProd.m
cobra/detectDeadEnds.m
cobra/docs/
cobra/docs/alpha.png
cobra/docs/c++.png
cobra/docs/c.png
cobra/docs/cobra/
cobra/docs/cobra/addLoopLawConstraints.html
cobra/docs/cobra/analyzeRxns.html
cobra/docs/cobra/changeGeneAssociation.html
cobra/docs/cobra/changeObjective.html
cobra/docs/cobra/changeRxnBounds.html
cobra/docs/cobra/changeRxnMets.html
cobra/docs/cobra/checkCobraModelUnique.html
cobra/docs/cobra/checkDuplicateRxn.html
cobra/docs/cobra/checkMassChargeBalance.html
cobra/docs/cobra/checkObjective.html
cobra/docs/cobra/computeElementalMatrix.html
cobra/docs/cobra/computeMW.html
cobra/docs/cobra/convertIrrevFluxDistribution.html
cobra/docs/cobra/convertModelToEX.html
cobra/docs/cobra/convertToIrreversible.html
cobra/docs/cobra/convertToReversible.html
cobra/docs/cobra/deleteModelGenes.html
cobra/docs/cobra/design/
cobra/docs/cobra/design/alphabetizeModel.html
cobra/docs/cobra/design/analyzeGCdesign.html
cobra/docs/cobra/design/analyzeOptKnock.html
cobra/docs/cobra/design/augmentBOF.html
cobra/docs/cobra/design/createBilevelMILPproblem.html
cobra/docs/cobra/design/doubleProductionEnvelope.html
cobra/docs/cobra/design/findCarbonRxns.html
cobra/docs/cobra/design/findHiCarbonRxns.html
cobra/docs/cobra/design/GDLS.html
cobra/docs/cobra/design/GetOptGeneSol.html
cobra/docs/cobra/design/menu.html
cobra/docs/cobra/design/multiProductionEnvelope.html
cobra/docs/cobra/design/multiProductionEnvelopeInorg.html
cobra/docs/cobra/design/optGene.html
cobra/docs/cobra/design/optGeneFitness.html
cobra/docs/cobra/design/optGeneFitnessTilt.html
cobra/docs/cobra/design/OptKnock.html
cobra/docs/cobra/design/randomKO.html
cobra/docs/cobra/design/setConstraintsIrrevModel.html
cobra/docs/cobra/design/simpleOptKnock.html
cobra/docs/cobra/design/testOptKnockSol.html
cobra/docs/cobra/design/theoretMaxProd.html
cobra/docs/cobra/detectDeadEnds.html
cobra/docs/cobra/doubleGeneDeletion.html
cobra/docs/cobra/doubleRobustnessAnalysis.html
cobra/docs/cobra/dynamicFBA.html
cobra/docs/cobra/enumerateOptimalSolutions.html
cobra/docs/cobra/external/
cobra/docs/cobra/external/addpath_recurse.html
cobra/docs/cobra/external/BuildMPS/
cobra/docs/cobra/external/BuildMPS/BuildMPS.html
cobra/docs/cobra/external/BuildMPS/menu.html
cobra/docs/cobra/external/BuildMPS/SaveMPS.html
cobra/docs/cobra/external/errobar_plus.html
cobra/docs/cobra/external/ezimplot3.html
cobra/docs/cobra/external/m2html/
cobra/docs/cobra/external/m2html/m2html.html
cobra/docs/cobra/external/m2html/mdot.html
cobra/docs/cobra/external/m2html/menu.html
cobra/docs/cobra/external/menu.html
cobra/docs/cobra/external/sparseNull.html
cobra/docs/cobra/extractCompModel.html
cobra/docs/cobra/extractMetModel.html
cobra/docs/cobra/extractSubNetwork.html
cobra/docs/cobra/extractSubSysModel.html
cobra/docs/cobra/findBlockedReaction.html
cobra/docs/cobra/findEpistaticInteractions.html
cobra/docs/cobra/findExcRxns.html
cobra/docs/cobra/findGeneIDs.html
cobra/docs/cobra/findGenesFromRxns.html
cobra/docs/cobra/findMetabolicJunctions.html
cobra/docs/cobra/findMetIDs.html
cobra/docs/cobra/findNeighborRxns.html
cobra/docs/cobra/findRxnIDs.html
cobra/docs/cobra/findRxnsFromGenes.html
cobra/docs/cobra/findRxnsFromMets.html
cobra/docs/cobra/findSubSysGen.html
cobra/docs/cobra/findTransRxns.html
cobra/docs/cobra/fluxomics/
cobra/docs/cobra/fluxomics/C13ConfidenceInterval.html
cobra/docs/cobra/fluxomics/c13solver/
cobra/docs/cobra/fluxomics/c13solver/cdv2idv.html
cobra/docs/cobra/fluxomics/c13solver/Combination.html
cobra/docs/cobra/fluxomics/c13solver/errorComputation2.html
cobra/docs/cobra/fluxomics/c13solver/errorComputation2_grad.html
cobra/docs/cobra/fluxomics/c13solver/generateIsotopomerSolver.html
cobra/docs/cobra/fluxomics/c13solver/idv2cdv.html
cobra/docs/cobra/fluxomics/c13solver/idv2idv.html
cobra/docs/cobra/fluxomics/c13solver/idv2mdv.html
cobra/docs/cobra/fluxomics/c13solver/menu.html
cobra/docs/cobra/fluxomics/c13solver/ratioScore.html
cobra/docs/cobra/fluxomics/c13solver/ratioScore_grad.html
cobra/docs/cobra/f